self-hosted-runner Configuration

To use, run the pipeline with -profile self-hosted-runner. This will download and launch the self-hosted-runner.config which has been pre-configured with a setup suitable for the self-hosted-runners (for now on AWS via terraform). The main aim of this profile is to fix the permission errors on self-hosted GitHub actions runners.

Config file

See config file on GitHub

// Config file for nf-core's self-hosted-runners
//Profile config names for nf-core/configs
params {
    config_profile_description = "Profile for nf-core's self-hosted runners provided by nf-core/configs."
    config_profile_contact = 'Matthias Hörtenhuber (@mashehu)'
    config_profile_url = ''
    // General cpus/memory/time requirements
    max_cpus = 2
    max_memory = 7.GB
    max_time = 72.h
docker {
    enabled = true
    docker.fixOwnership = true
    docker.userEmulation = false
    docker.runOptions = '--platform=linux/amd64'