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nf-core
nf-core/
hlatyping
Precision HLA typing from next-generation sequencing data
dna
hla
hla-typing
immunology
optitype
personalized-medicine
rna
Launch version 2.2.0
https://github.com/nf-core/hlatyping
Introduction
Usage
Parameters
Output
Results
Releases
2.2.0
2.2.0
2.1.0
2.0.0
1.2.0
1.1.5
1.1.4
1.1.3
1.1.2
1.1.1
1.1.0
1.0.0
1.0.0-rc1
dev
Results
Introduction
Usage
Parameters
Output
Results
Releases
2.2.0
2.2.0
2.1.0
2.0.0
1.2.0
1.1.5
1.1.4
1.1.3
1.1.2
1.1.1
1.1.0
1.0.0
1.0.0-rc1
dev
nf-core-awsmegatests
hlatyping
results-3237d20e7e611d8bbf8c37e637202dfe8a23e996/
Name
Last Modified
Size
multiqc/
optitype/
pipeline_info/
yara/
SAMPLE_BAM_1.fq.gz
2 months
2.24 MB
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SAMPLE_BAM_1_fastqc.html
2 months
581 kB
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SAMPLE_BAM_1_fastqc.zip
2 months
337 kB
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SAMPLE_BAM_2.fq.gz
2 months
2.28 MB
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SAMPLE_BAM_2_fastqc.html
2 months
592 kB
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SAMPLE_BAM_2_fastqc.zip
2 months
342 kB
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SAMPLE_BAM_other.fq.gz
2 months
28 B
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SAMPLE_BAM_singleton.fq.gz
2 months
3.36 MB
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SAMPLE_FASTQ_1_fastqc.html
2 months
588 kB
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SAMPLE_FASTQ_1_fastqc.zip
2 months
340 kB
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SAMPLE_FASTQ_2_fastqc.html
2 months
591 kB
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SAMPLE_FASTQ_2_fastqc.zip
2 months
346 kB
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SAMPLE_FASTQ_CAT_1_fastqc.html
2 months
588 kB
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SAMPLE_FASTQ_CAT_1_fastqc.zip
2 months
340 kB
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SAMPLE_FASTQ_CAT_2_fastqc.html
2 months
591 kB
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SAMPLE_FASTQ_CAT_2_fastqc.zip
2 months
347 kB
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SAMPLE_FASTQ_RNA_1_fastqc.html
2 months
610 kB
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SAMPLE_FASTQ_RNA_1_fastqc.zip
2 months
369 kB
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SAMPLE_FASTQ_RNA_2_fastqc.html
2 months
604 kB
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SAMPLE_FASTQ_RNA_2_fastqc.zip
2 months
368 kB
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SAMPLE_FASTQ_RNA_CAT_1_fastqc.html
2 months
610 kB
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SAMPLE_FASTQ_RNA_CAT_1_fastqc.zip
2 months
369 kB
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SAMPLE_FASTQ_RNA_CAT_2_fastqc.html
2 months
604 kB
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SAMPLE_FASTQ_RNA_CAT_2_fastqc.zip
2 months
369 kB
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example_pe.bam
2 months
66 MB
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hla_reference_dna.fasta.lf.drp
2 months
4.2 MB
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hla_reference_dna.fasta.lf.drs
2 months
1 B
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hla_reference_dna.fasta.lf.drv
2 months
8.4 MB
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hla_reference_dna.fasta.lf.pst
2 months
20 B
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hla_reference_dna.fasta.rid.concat
2 months
186 kB
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hla_reference_dna.fasta.rid.limits
2 months
44.7 kB
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hla_reference_dna.fasta.sa.ind
2 months
4.2 MB
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hla_reference_dna.fasta.sa.len
2 months
4 B
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hla_reference_dna.fasta.sa.val
2 months
10.1 MB
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hla_reference_dna.fasta.txt.concat
2 months
6.4 MB
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hla_reference_dna.fasta.txt.limits
2 months
89.4 kB
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hla_reference_dna.fasta.txt.size
2 months
24 B
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hla_reference_rna.fasta.lf.drp
2 months
1 MB
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hla_reference_rna.fasta.lf.drs
2 months
1 B
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hla_reference_rna.fasta.lf.drv
2 months
2.01 MB
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hla_reference_rna.fasta.lf.pst
2 months
20 B
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hla_reference_rna.fasta.rid.concat
2 months
58.8 kB
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hla_reference_rna.fasta.rid.limits
2 months
29.4 kB
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hla_reference_rna.fasta.sa.ind
2 months
1 MB
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hla_reference_rna.fasta.sa.len
2 months
4 B
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hla_reference_rna.fasta.sa.val
2 months
2.42 MB
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hla_reference_rna.fasta.txt.concat
2 months
1.53 MB
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hla_reference_rna.fasta.txt.limits
2 months
58.7 kB
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hla_reference_rna.fasta.txt.size
2 months
24 B
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is_singleend.txt
2 months
6 B
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