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nf-core
nf-core/
hlatyping
Precision HLA typing from next-generation sequencing data
dna
hla
hla-typing
immunology
optitype
personalized-medicine
rna
Launch version 2.2.0
https://github.com/nf-core/hlatyping
Introduction
Usage
Parameters
Output
Results
Releases
2.2.0
2.2.0
2.1.0
2.0.0
1.2.0
1.1.5
1.1.4
1.1.3
1.1.2
1.1.1
1.1.0
1.0.0
1.0.0-rc1
dev
Results
Introduction
Usage
Parameters
Output
Results
Releases
2.2.0
2.2.0
2.1.0
2.0.0
1.2.0
1.1.5
1.1.4
1.1.3
1.1.2
1.1.1
1.1.0
1.0.0
1.0.0-rc1
dev
nf-core-awsmegatests
hlatyping
results-3237d20e7e611d8bbf8c37e637202dfe8a23e996/
Name
Last Modified
Size
multiqc/
optitype/
pipeline_info/
yara/
SAMPLE_BAM_1.fq.gz
about 1 month
2.24 MB
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SAMPLE_BAM_1_fastqc.html
about 1 month
581 kB
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SAMPLE_BAM_1_fastqc.zip
about 1 month
337 kB
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SAMPLE_BAM_2.fq.gz
about 1 month
2.28 MB
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SAMPLE_BAM_2_fastqc.html
about 1 month
592 kB
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SAMPLE_BAM_2_fastqc.zip
about 1 month
342 kB
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SAMPLE_BAM_other.fq.gz
about 1 month
28 B
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SAMPLE_BAM_singleton.fq.gz
about 1 month
3.36 MB
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SAMPLE_FASTQ_1_fastqc.html
about 1 month
588 kB
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SAMPLE_FASTQ_1_fastqc.zip
about 1 month
340 kB
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SAMPLE_FASTQ_2_fastqc.html
about 1 month
591 kB
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SAMPLE_FASTQ_2_fastqc.zip
about 1 month
346 kB
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SAMPLE_FASTQ_CAT_1_fastqc.html
about 1 month
588 kB
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SAMPLE_FASTQ_CAT_1_fastqc.zip
about 1 month
340 kB
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SAMPLE_FASTQ_CAT_2_fastqc.html
about 1 month
591 kB
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SAMPLE_FASTQ_CAT_2_fastqc.zip
about 1 month
347 kB
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SAMPLE_FASTQ_RNA_1_fastqc.html
about 1 month
610 kB
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SAMPLE_FASTQ_RNA_1_fastqc.zip
about 1 month
369 kB
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SAMPLE_FASTQ_RNA_2_fastqc.html
about 1 month
604 kB
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SAMPLE_FASTQ_RNA_2_fastqc.zip
about 1 month
368 kB
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SAMPLE_FASTQ_RNA_CAT_1_fastqc.html
about 1 month
610 kB
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SAMPLE_FASTQ_RNA_CAT_1_fastqc.zip
about 1 month
369 kB
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SAMPLE_FASTQ_RNA_CAT_2_fastqc.html
about 1 month
604 kB
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SAMPLE_FASTQ_RNA_CAT_2_fastqc.zip
about 1 month
369 kB
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example_pe.bam
about 1 month
66 MB
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hla_reference_dna.fasta.lf.drp
about 1 month
4.2 MB
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hla_reference_dna.fasta.lf.drs
about 1 month
1 B
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hla_reference_dna.fasta.lf.drv
about 1 month
8.4 MB
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hla_reference_dna.fasta.lf.pst
about 1 month
20 B
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hla_reference_dna.fasta.rid.concat
about 1 month
186 kB
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hla_reference_dna.fasta.rid.limits
about 1 month
44.7 kB
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hla_reference_dna.fasta.sa.ind
about 1 month
4.2 MB
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hla_reference_dna.fasta.sa.len
about 1 month
4 B
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hla_reference_dna.fasta.sa.val
about 1 month
10.1 MB
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hla_reference_dna.fasta.txt.concat
about 1 month
6.4 MB
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hla_reference_dna.fasta.txt.limits
about 1 month
89.4 kB
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hla_reference_dna.fasta.txt.size
about 1 month
24 B
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hla_reference_rna.fasta.lf.drp
about 1 month
1 MB
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hla_reference_rna.fasta.lf.drs
about 1 month
1 B
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hla_reference_rna.fasta.lf.drv
about 1 month
2.01 MB
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hla_reference_rna.fasta.lf.pst
about 1 month
20 B
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hla_reference_rna.fasta.rid.concat
about 1 month
58.8 kB
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hla_reference_rna.fasta.rid.limits
about 1 month
29.4 kB
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hla_reference_rna.fasta.sa.ind
about 1 month
1 MB
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hla_reference_rna.fasta.sa.len
about 1 month
4 B
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hla_reference_rna.fasta.sa.val
about 1 month
2.42 MB
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hla_reference_rna.fasta.txt.concat
about 1 month
1.53 MB
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hla_reference_rna.fasta.txt.limits
about 1 month
58.7 kB
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hla_reference_rna.fasta.txt.size
about 1 month
24 B
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is_singleend.txt
about 1 month
6 B
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