Screen assemblies for antimicrobial resistance against multiple databases
meta
Groovy Map containing sample information e.g. [ id:‘test’, single_end
assembly
FASTA, GenBank or EMBL formatted file
*.{fa,fasta,fna,fa.gz,fasta.gz,fna.gz,gbk,gbk.gz,embl,embl.gz}
versions
File containing software versions
versions.yml
summary
Tab-delimited report of aggregated results
*.{txt}
Mass screening of contigs for antibiotic resistance genes
