modules/ampcombi2_cluster
A submodule that clusters the merged AMP hits generated from ampcombi2/parsetables and ampcombi2/complete using MMseqs2 cluster.
antimicrobial peptidesampsparsingreportingalignclusteringmmseqs2
Description
A submodule that clusters the merged AMP hits generated from ampcombi2/parsetables and ampcombi2/complete using MMseqs2 cluster.
Output
Name (Type)
Description
Pattern
A file containing all the results from the merged input table ‘Ampcombi_summary.tsv’, but also including the cluster id number. The clustering is done using MMseqs2 cluster.
*.tsv
A file containing the representative sequences of the clusters estimated by the tool. The clustering is done using MMseqs2 cluster.
*.tsv
A log file that captures the standard output for the entire process in a log file. Can be activated by --log
.
*.log