Description

A submodule that merges all output summary tables from ampcombi/parsetables in one summary file.

Input

Name (Type)
Description
Pattern

summaries (list)

The path to the list of files corresponding to each sample as generated by ampcombi2/parsetables.

[*_ampcombi.tsv, *_ampcombi.tsv]

Output

Name (Type)
Description
Pattern

tsv (file)

A file containing the complete AMPcombi summaries from all processed samples.

*.tsv

log (file)

A log file that captures the standard output for the entire process in a log file. Can be activated by --log.

*.log

versions (file)

File containing software versions

versions.yml
maintainer
Github user darcy220606
get in touch
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Tools

ampcombi2/complete
MIT

This merges the per sample AMPcombi summaries generated by running 'ampcombi2/parsetables'.

github.com/Darcy220606/AMPcombi https://github.com/Darcy220606/AMPcombi/tree/dev