Description

Identify antimicrobial resistance in gene or protein sequences

Input

No input parameters

Output

name:type
description
pattern

db{:bash}

amrfinderdb.tar.gz{:bash}

:file

The latest AMRFinder+ database in a compressed tarball

*.tar.gz

versions_amrfinder{:bash}

${task.process}{:bash}

:string

The name of the process

amrfinder{:bash}

:string

The name of the tool

amrfinder --version{:bash}

:eval

The expression to obtain the version of the tool

Topics

name:type
description
pattern

versions{:bash}

${task.process}{:bash}

:string

The name of the process

amrfinder{:bash}

:string

The name of the tool

amrfinder --version{:bash}

:eval

The expression to obtain the version of the tool

Tools

amrfinderplus
Public Domain

AMRFinderPlus finds antimicrobial resistance and other genes in protein or nucleotide sequences.