Description

Identify antimicrobial resistance in gene or protein sequences

Input

No input parameters

Output

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:‘test’, single_end

]

versions (file)

File containing software versions

versions.yml

db (file)

The latest AMRFinder+ database in a compressed tarball

*.tar.gz

Tools

amrfinderplus
Public Domain

AMRFinderPlus finds antimicrobial resistance and other genes in protein or nucleotide sequences.