modules/antismash_antismashlite
antiSMASH allows the rapid genome-wide identification, annotation and analysis of secondary metabolite biosynthesis gene clusters.
secondary metabolitesBGCbiosynthetic gene clustergenome miningNRPSRiPPantibioticsprokaryotesbacteriaeukaryotesfungiantismash
Description
antiSMASH allows the rapid genome-wide identification, annotation and analysis of secondary metabolite biosynthesis gene clusters.
Input
name:type
description
pattern
A local copy of an AntiSMASH installation folder. This is required when running with docker and singularity (not required for conda), due to attempted ‘modifications’ of files during database checks in the installation directory, something that cannot be done in immutable docker/singularity containers. Therefore, a local installation directory needs to be mounted (including all modified files from the downloading step) to the container as a workaround.
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