Download and prepare database for Ariba analysis
meta
:map
Groovy Map containing sample information e.g. [ id:‘test’ ]
db_name
:string
A database to setup up for Ariba
db
:file
An Ariba prepared database
*.tar.gz
${db_name}.tar.gz
versions_ariba
${task.process}
The name of the process
ariba
The name of the tool
ariba version | sed -nE "s/ARIBA version: //p"
:eval
The expression to obtain the version of the tool
versions
ARIBA: Antibiotic Resistance Identification By Assembly
