Aggregates fastq files with demultiplexed reads
meta
Groovy Map containing sample information e.g. [ id:‘test’, single_end
fastq_dir
Directory containing the fastq files with demultiplexed reads
*
fastq
Aggregated FastQ files
*.{fastq.gz}
versions
File containing software versions
versions.yml
ARTIC pipeline - a bioinformatics pipeline for working with virus sequencing data sequenced with nanopore
