Description

Assembly summary statistics in JSON format

Input

name:type
description
pattern

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end

]

assembly:file

FASTA file for a given assembly

*.fasta

Output

name:type
description
pattern

json

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end

]

*.json:file

Assembly statistics in JSON format

*.json

versions

versions.yml:file

File containing software versions

versions.yml

Tools

assemblyscan
MIT

Assembly summary statistics in JSON format

github.com/rpetit3/assembly-scan
included in
pairgenomealign
maintainers
Github user sateeshperi
Github user mjcipriano
get in touch
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