Description

mkarv function of a corresponding ataqv tool

Input

Name (Type)
Description
Pattern

json (file)

The JSON file with ataqv metrics

*.json

Output

Name (Type)
Description
Pattern

versions (file)

File containing software versions

versions.yml

html (directory)

Web application to visualize results in HTML format

*.html

Tools

ataqv
GPL v3

ataqv is a toolkit for measuring and comparing ATAC-seq results. It was written to help understand how well ATAC-seq assays have worked, and to make it easier to spot differences that might be caused by library prep or sequencing.