write your description here
meta{:bash}
:map
Groovy Map containing sample information e.g. [ id:'test', single_end:false ]
[ id:'test', single_end:false ]
bam{:bash}
:file
Sorted BAM/CRAM/SAM file
*.{bam,cram,sam}
json{:bash}
*.json{:bash}
json containing bam statistics
*.json
versions_bamstats{:bash}
${task.process}{:bash}
:string
The name of the process
bamstats{:bash}
The name of the tool
bamstats --version | grep "version: " | sed -e s"/version: //"{:bash}
:eval
The expression to obtain the version of the tool
versions{:bash}
A command line tool to compute mapping statistics from a BAM file
