Description

BamTools provides both a programmer’s API and an end-user’s toolkit for handling BAM files.

Input

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:‘test’, single_end

]

bam (file)

A list of one or more BAM files to merge and then split

*.bam

Output

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:‘test’, single_end

]

versions (file)

File containing software versions

versions.yml

bam (file)

Several Bam files

*.bam
included in
scnanoseq
maintainers
Github user sguizard
Github user matthdsm
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Tools