Description

Render an assembly graph in GFA 1.0 format to PNG and SVG image formats

Input

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:‘test’, single_end

]

gfa (file)

Assembly graph in GFA 1.0 format

*.gfa

Output

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:‘test’, single_end

]

png (file)

Bandage image in PNG format

*.png

svg (file)

Bandage image in SVG format

*.svg

versions (file)

File containing software versions

versions.yml
included in
viralrecon
author
Github user heuermh
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Tools

bandage
GPL-3.0-or-later

Bandage - a Bioinformatics Application for Navigating De novo Assembly Graphs Easily

github.com/rrwick/Bandage