Compresses VCF files
meta:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
vcf:file
VCF file
*.{vcf}
tbi:file
tabix index file
*.{tbi}
fasta:file
FASTA reference file
*.{fasta,fa}
mask:file
BED file used for masking
*.{bed}
fasta
*.fa:file
FASTA reference consensus file
versions
versions.yml:file
File containing software versions
versions.yml
Create consensus sequence by applying VCF variants to a reference fasta file.
