Filters VCF files
meta:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end
vcf:file
VCF input file
*.{vcf,bcf,vcf.gz,bcf.gz}
tbi:file
VCF index file
*.tbi
vcf
*.${extension}:file
VCF filtered output file
tbi
*.tbi:file
Alternative VCF file index
csi
*.csi:file
Default VCF file index
*.csi
versions
versions.yml:file
File containing software versions
versions.yml
Apply fixed-threshold filters to VCF files.