Description

Apply set operations to VCF files

Input

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:‘test’, single_end

]

vcfs (list)

List containing 2 or more vcf files
e.g. [ ‘file1.vcf’, ‘file2.vcf’ ]

tbis (list)

List containing the tbi index files corresponding to the vcfs input files
e.g. [ ‘file1.vcf.tbi’, ‘file2.vcf.tbi’ ]

Output

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:‘test’, single_end

]

results (directory)

Folder containing the set operations results perform on the vcf files

${prefix}

versions (file)

File containing software versions

versions.yml