Apply set operations to VCF files
meta:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
vcfs:list
List containing 2 or more vcf/bcf files. These must be compressed and have an associated index. e.g. [ ‘file1.vcf.gz’, ‘file2.vcf’ ]
tbis:list
List containing the tbi index files corresponding to the vcf/bcf input files e.g. [ ‘file1.vcf.tbi’, ‘file2.vcf.tbi’ ]
results
${prefix}", type: "dir:directory
Folder containing the set operations results perform on the vcf files
${prefix}
versions
versions.yml:file
File containing software versions
versions.yml
Computes intersections, unions and complements of VCF files.