modules/bcftools_pluginsplit
Split VCF by sample, creating single- or multi-sample VCFs.
splitvcfgenomics
Input
name:type
description
pattern
A tab-separated file determining which samples should be in which output file
column 1: The sample name(s) in the input file
column 2: The sample name(s) to use in the output file (use - to keep the original name)
column 3: The name of the output file
Either this or a groups file should be given
*A tab-separated file determining which samples should be in which output file(s)
column 1: The sample name(s) in the input file
column 2: The sample name(s) to use in the output file (use - to keep the original name)
column 3: The name of the output file(s)
Either this or a samples file should be given
*