Description

Split a vcf file into files per chromosome

Input

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:‘test’, single_end

]

vcf (file)

Compressed vcf file

*.vcf.gz

tbi (file)

Compressed vcf file index

*.{tbi,csi}

Output

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:‘test’, single_end

]

split_vcf (file)

Compressed vcf files per chromosome

*.vcf.gz

versions (file)

File containing software versions

versions.yml