Description

Split a vcf file into files per chromosome

Input

name:type
description
pattern

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end

]

vcf:file

Compressed vcf file

*.vcf.gz

tbi:file

Compressed vcf file index

*.{tbi,csi}

Output

name:type
description
pattern

split_vcf

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end

]

*.vcf.gz:file

Compressed vcf files per chromosome

*.vcf.gz

versions

versions.yml:file

File containing software versions

versions.yml