Split a vcf file into files per chromosome
meta
:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
vcf
:file
Compressed vcf file
*.vcf.gz
tbi
Compressed vcf file index
*.{tbi,csi}
split_vcf
Compressed vcf files per chromosome
versions_bcftools
${task.process}
:string
The process the versions were collected from
bcftools
The tool name
bcftools --version | sed '1!d; s/^.*bcftools //'
The command used to generate the version of the tool
versions
Sort VCF files by coordinates.
