extract sequences in a FASTA file based on intervals defined in a feature file.
meta:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end
bed:file
Bed feature file
*.{bed}
fasta:file
Input fasta file
*.{fa,fasta}
fasta
*.fa:file
Output fasta file with extracted sequences
*.{fa}
versions
versions.yml:file
File containing software versions
versions.yml
A set of tools for genomic analysis tasks, specifically enabling genome arithmetic (merge, count, complement) on various file types.
