Description

Adds a specified number of bases in each direction (unique values may be specified for either -l or -r)

Input

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:‘test’, single_end

]

bed (file)

Input BED file

*.{bed}

Output

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:‘test’, single_end

]

bed (file)

Slopped BED file

*.{bed}

versions (file)

File containing software versions

versions.yml
authors
Github user Emiller88 Github user sruthipsuresh Github user drpatelh
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Tools

bedtools
MIT

A set of tools for genomic analysis tasks, specifically enabling genome arithmetic (merge, count, complement) on various file types.

bedtools.readthedocs.io/en/latest/content/tools/slop