Description

Split BED files into several smaller BED files

Input

name:type
description
pattern

meta{:bash}

:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]

bed{:bash}

:file

BED file

*.bed

count{:bash}

:integer

Number of lines per split file

Output

name:type
description
pattern

beds{:bash}

meta{:bash}

:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]

*.bed{:bash}

:list

list of split BED files

*.bed

versions{:bash}

versions.yml{:bash}

:file

File containing software versions

versions.yml

Tools

bedtools
MIT GPL v2

A powerful toolset for genome arithmetic