Merge a list of sorted bam files
meta:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end
bam:file
List containing 1 or more bam files
bam
${prefix}.bam:file
Merged BAM file
*.bam
bam_index
*.bai:file
BAM index file
*
checksum
*.md5:file
Checksum file
versions
versions.yml:file
File containing software versions
versions.yml
biobambam is a set of tools for early stage alignment file processing.