Description

Indexes a reference genome for use with Biscuit

Input

name:type
description
pattern

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end

]

fasta:file

Input genome fasta file

Output

name:type
description
pattern

index

meta:directory

Directory containing biscuit genome index

index

BiscuitIndex:directory

Directory containing biscuit genome index

index

versions

versions.yml:file

File containing software versions

versions.yml

Tools

biscuit
MIT

A utility for analyzing sodium bisulfite conversion-based DNA methylation/modification data

huishenlab.github.io/biscuit huishenlab.github.io/biscuit/docs/alignment https://github.com/huishenlab/biscuit
Github user njspix
Github user sateeshperi
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