Description

Indexes a reference genome for use with Biscuit

Input

name:type
description
pattern

meta{:bash}

:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]

fasta{:bash}

:file

Input genome fasta file

Output

name:type
description
pattern

index{:bash}

meta{:bash}

:directory

Directory containing biscuit genome index

index

BiscuitIndex{:bash}

:directory

Directory containing biscuit genome index

index

versions{:bash}

versions.yml{:bash}

:file

File containing software versions

versions.yml

Tools

biscuit
MIT

A utility for analyzing sodium bisulfite conversion-based DNA methylation/modification data