Description

Queries a BLAST DNA database

Input

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:‘test’, single_end

]

fasta (file)

Input fasta file containing queries sequences

*.{fa,fasta}

db (directory)

Directory containing blast database

*

Output

Name (Type)
Description
Pattern

txt (file)

File containing blastn hits

*.{blastn.txt}

versions (file)

File containing software versions

versions.yml

Tools

blast
US-Government-Work

BLAST finds regions of similarity between biological sequences.