Description

Queries a BLAST DNA database

Input

name:type
description
pattern

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end

]

fasta:file

Input fasta file containing queries sequences

*.{fa,fasta,fa.gz,fasta.gz}

meta2:map

Groovy Map containing db information e.g. [ id:‘test2’, single_end

]

db:directory

Directory containing the blast database

*

Output

name:type
description
pattern

txt

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end

]

*.txt:file

File containing blastn hits

*.txt

versions

versions.yml:file

File containing software versions

versions.yml