Queries a BLAST DNA database
meta
:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
fasta
:file
Input fasta file containing queries sequences
*.{fa,fasta,fa.gz,fasta.gz}
meta2
Groovy Map containing db information e.g. [ id:‘test2’, single_end:false ]
db
:directory
Directory containing the blast database
*
txt
*.txt
File containing blastn hits
versions_tblastn
${task.process}
:string
The name of the process
tblastn
The name of the tool
tblastn -version 2>&1 | sed 's/^.*tblastn: //; s/ .*\$//'
:eval
The expression to obtain the version of the tool
versions
Protein to Translated Nucleotide BLAST.
