Downloads a BLAST database from NCBI
meta{:bash}
:map
Groovy Map containing sample information e.g. [ id:‘mito’, single_end:false ]
name{:bash}
:string
Name of the NCBI BLAST database to be downloaded
db{:bash}
prefix{:bash}
:directory
Output directory containing blast database files
*
versions_updateblastdb{:bash}
${task.process}{:bash}
The name of the process
updateblastdb{:bash}
The name of the tool
update_blastdb.pl -version 2>&1 | tail -n1 | rev | cut -f1 -d ' ' | rev{:bash}
:eval
The expression to obtain the version of the tool
versions{:bash}
BLAST finds regions of similarity between biological sequences.
