Description

Downloads a BLAST database from NCBI

Input

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:‘mito’, single_end

]

name (string)

Name of the NCBI BLAST database to be downloaded

Output

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:‘mito’, single_end

]

db (directory)

Output directory containing blast database files

*

versions (file)

File containing software versions

versions.yml
maintainer
Github user toniher
get in touch
Ask a question on Slack Open an issue on GitHub

Tools

blast
US-Government-Work

BLAST finds regions of similarity between biological sequences.

blast.ncbi.nlm.nih.gov/Blast.cgi blast.ncbi.nlm.nih.gov/Blast.cgi?CMD=Web&PAGE_TYPE=Blastdocs 10.1016/S0022-2836(05)80360-2