Description

Downloads a BLAST database from NCBI

Input

name:type
description
pattern

meta{:bash}

:map

Groovy Map containing sample information e.g. [ id:‘mito’, single_end:false ]

name{:bash}

:string

Name of the NCBI BLAST database to be downloaded

Output

name:type
description
pattern

db{:bash}

meta{:bash}

:map

Groovy Map containing sample information e.g. [ id:‘mito’, single_end:false ]

prefix{:bash}

:directory

Output directory containing blast database files

*

versions{:bash}

versions.yml{:bash}

:file

File containing software versions

versions.yml

Tools

blast
US-Government-Work

BLAST finds regions of similarity between biological sequences.