Description

Create bowtie index for reference genome

Input

name:type
description
pattern

meta:map

Groovy Map containing information about the genome fasta e.g. [ id:‘test’ ]

fasta:file

Input genome fasta file

Output

name:type
description
pattern

index

meta:map

Groovy Map containing nformation about the genome fasta e.g. [ id:‘test’ ]

bowtie:file

Folder containing bowtie genome index files

*.ebwt

versions

versions.yml:file

File containing software versions

versions.yml

Tools

bowtie
Artistic-2.0

bowtie is a software package for mapping DNA sequences against a large reference genome, such as the human genome.