Create bowtie index for reference genome
meta{:bash}
:map
Groovy Map containing information about the genome fasta e.g. [ id:‘test’ ]
fasta{:bash}
:file
Input genome fasta file
index{:bash}
bowtie{:bash}
:string
Folder containing bowtie genome index files
*.ebwt
versions_bowtie{:bash}
${task.process}{:bash}
The name of the process
bowtie --version 2>&1 | sed -n 's/.*bowtie-align-s version //p'{:bash}
:eval
The expression to obtain the version of the tool
versions{:bash}
bowtie is a software package for mapping DNA sequences against a large reference genome, such as the human genome.
