Description

Performs indexing of c2t converted reference genome

Input

Name (Type)
Description
Pattern

fasta (file)

Input genome fasta file

Output

Name (Type)
Description
Pattern

index (dir)

Directory containing bwameth genome index

index

versions (file)

File containing software versions

versions.yml
included in
methylseq
maintainer
Github user phue
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Tools

bwameth
MIT

Fast and accurate alignment of BS-Seq reads using bwa-mem and a 3-letter genome.

github.com/brentp/bwa-meth