Description

Concatenates fastq files

Input

name:type
description
pattern

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]

reads:file

List of input FastQ files to be concatenated.

Output

name:type
description
pattern

reads

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]

*.merged.fastq.gz:file

Merged fastq file

*.{merged.fastq.gz}

versions

versions.yml:file

File containing software versions

versions.yml

Tools

cat
GPL-3.0-or-later

The cat utility reads files sequentially, writing them to the standard output.