Output
Name (Type)
Description
Pattern
CheckV’s main output containing integrated results from the three main modules (contamination, completeness, complete genomes) with overall quality of contigs
${prefix}/quality_summary.tsv
CheckV’s detailed overview table on estimating completeness
${prefix}/completeness.tsv
CheckV’s detailed overview table on estimating contamination
${prefix}/contamination.tsv
CheckV’s detailed overview table on the identified putative complete genomes
${prefix}/complete_genomes.tsv
