Indexes a fasta reference genome ready for chromatin profiling.
meta
:map
Groovy Map containing reference information e.g. [ id:‘test’ ]
fasta
:file
Reference genome FASTA file
*.{fa,fasta,fna}
index
*.index
Index file of the reference genome
*.{index}
versions_chromap
${task.process}
:string
The name of the process
chromap
The name of the tool
chromap --version 2>&1
:eval
The expression to obtain the version of the tool
versions
Fast alignment and preprocessing of chromatin profiles
