Indexes a fasta reference genome ready for chromatin profiling.
meta{:bash}
:map
Groovy Map containing reference information e.g. [ id:‘test’ ]
fasta{:bash}
:file
Fasta reference file.
fai{:bash}
Fasta reference index file.
index{:bash}
*.index{:bash}
Index file of the reference genome
*.{index}
versions_chromap{:bash}
${task.process}{:bash}
:string
The name of the process
chromap{:bash}
The name of the tool
chromap --version 2>&1{:bash}
:eval
The expression to obtain the version of the tool
versions{:bash}
Fast alignment and preprocessing of chromatin profiles
