Annotate circRNAs detected in the output from CIRCexplorer2 parse
meta
Groovy Map containing sample information e.g. [ id:‘test’, single_end
junctions
Reformatted junctions file
*.{junction}
fasta
Genome FASTA file
*.{fa,fasta}
gene_annotation
Reformatted GTF file for CIRCexplorer2
*.{txt}
txt
Annotated circRNA TXT file
versions
File containing software versions
versions.yml
Circular RNA analysis toolkits