convert2vcf.pl is command line tool to convert CNVnator calls to vcf format.
meta
:map
Groovy Map containing sample information e.g. [ id:'test', single_end:false ]
[ id:'test', single_end:false ]
calls
:file
A tab file containing CNVnator calls
*.tab
vcf
*.vcf
CNVnator calls in vcf format
versions_cnvnator
${task.process}
:string
The name of the process
cnvnator
The name of the tool
cnvnator 2>&1 | sed -n '3s/CNVnator v//p'
:eval
The expression to obtain the version of the tool
versions
Tool for calling copy number variations.
