calculates read depth histograms
meta:map
Groovy Map containing sample information e.g. [ id:‘test’ ]
pytor:file
pytor file containing read depth data
*.{pytor}
bin_sizes:string
list of binsizes separated by space e.g. “1000 10000” and “1000”
pytor
${pytor.baseName}.pytor:file
pytor file containing read depth histograms binned based on given bin size(s)
versions
versions.yml:file
File containing software versions
versions.yml
calling CNVs using read depth
