Cut up fasta file in non-overlapping or overlapping parts of equal length.
meta{:bash}
:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
fasta{:bash}
:file
(Uncompressed) FASTA file containing contigs
*.{fasta,fna,fa,fas}
bed{:bash}
:boolean
Specify whether to generate a BED file describing where each contig was cut up
*.fasta{:bash}
*.fasta
*.bed{:bash}
Optional BED File containing locations on original contigs where they were cut up.
*.bed
versions_concoct{:bash}
${task.process}{:bash}
:string
The name of the process
concoct{:bash}
The name of the tool
concoct --version | cut -d " " -f2{:bash}
:eval
The expression to obtain the version of the tool
versions{:bash}
Clustering cONtigs with COverage and ComposiTion
