Creates a FASTA file for each new cluster assigned by CONCOCT
meta:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end
original_fasta:file
Original input FASTA file to CONOCT cut_up_fasta
*.{fasta,fna,fa,fas}
csv:boolean
Output table of merge_cutup_clustering with new cluster assignments
.csv
fasta
${prefix}/*.fa.gz:file
FASTA files containing CONCOCT predicted bin clusters, named numerically by CONCOCT cluster ID in a directory called fasta_bins
fasta_bins
*.fa.gz
versions
versions.yml:file
File containing software versions
versions.yml
Clustering cONtigs with COverage and ComposiTion
