Calculate confidence scores from Kraken2 output
meta:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
kraken_result:file
Raw Kraken2 standard output file
kraken_taxon_db:file
Kraken2 taxo.k2d database file
score
*.score:file
Conifer report file containing confidence scores of Kraken2 classified reads.
*.score
versions
versions.yml:file
File containing software versions
versions.yml
