Description

Plot Freec output

Input

name:type
description
pattern

meta

:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]

ratio

:file

ratio file generated by FREEC

*.ratio.txt

Output

name:type
description
pattern

bed

meta

:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]

*.bed

:file

Bed file

*.bed

versions_controlfreec

${task.process}

:string

The name of the process

controlfreec

:string

The name of the tool

11.6b

:string

The expression to obtain the version of the tool

Topics

name:type
description
pattern

versions

${task.process}

:string

The name of the process

controlfreec

:string

The name of the tool

11.6b

:string

The expression to obtain the version of the tool

Tools

controlfreec
GPL >=2

Copy number and genotype annotation from whole genome and whole exome sequencing data.