Format Freec output to circos input format
meta{:bash}
:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
ratio{:bash}
:file
ratio file generated by FREEC
*.ratio.txt
circos{:bash}
*.circos.txt{:bash}
Txt file
*.circos.txt
versions_controlfreec{:bash}
${task.process}{:bash}
:string
The name of the process
controlfreec{:bash}
The name of the tool
echo 11.6b{:bash}
:eval
The expression to obtain the version of the tool
versions{:bash}
Copy number and genotype annotation from whole genome and whole exome sequencing data.
