Plot Freec output
meta
Groovy Map containing sample information e.g. [ id:‘test’, single_end
ratio
ratio file generated by FREEC
*.ratio.txt
baf
.BAF file generated by FREEC
*.BAF
versions
File containing software versions
versions.yml
png_baf
Image of BAF plot
*_BAF.png
png_ratio_log2
Image of ratio log2 plot
*_ratio.log2.png
png_ratio
Image of ratio plot
*_ratio.png
Copy number and genotype annotation from whole genome and whole exome sequencing data.