Generate fixed-width genomic bins
meta
:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
chromsizes
:file
Path to a chromsizes file.
cool_bin
:integer
Resolution (bin size) in base pairs
bed
Groovy Map containing sample information
*.bed
Genome segmentation at a fixed resolution as a BED file.
versions_cooler
${task.process}
:string
The name of the process
cooler
The name of the tool
cooler --version 2>&1 | sed "s/cooler, version //"
:eval
The expression to obtain the version of the tool
versions
Sparse binary format for genomic interaction matrices
