Indexes a directory of fasta files for use with CoPTR
meta:map
Groovy Map containing genome information
indexfasta:file
Fasta file(s) ending in [.fasta, .fna, .fa] to be used to create the index.
*.{.fasta,.fna,.fa}
index_dir
bowtie2:map
index genome directory
*.{genome}
versions
versions.yml:file
File containing software versions
versions.yml
Accurate and robust inference of microbial growth dynamics from metagenomic sequencing reads.
