Merge reads that were mapped to multiple indices
meta
:map
Groovy Map containing sample information e.g. [ id:'sample1', single_end:false ]
[ id:'sample1', single_end:false ]
bams
:file
bam files to merge. Assumes that the reads were mapped to different indices.
*.bam
bam
Merged BAM file
*.{bam}
versions_coptr
${task.process}
:string
The name of the process
coptr
The name of the tool
coptr |& sed -E '11!d ; s/CoPTR.*?\(v(.*?)\).*/\1/'
:eval
The expression to obtain the version of the tool
versions
Accurate and robust inference of microbial growth dynamics from metagenomic sequencing reads.
