Description

remove false positives of functional crispr genomics due to CNVs

Input

name:type
description
pattern

meta

:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]

count_file

:file

sgRNA raw counts

*.tsv

library_file

:file

sgRNA library

*.tsv

min_reads

:integer

Minimum number of reads

min_targeted_genes

:integer

Minimum number of targeted genes

Output

name:type
description
pattern

norm_count_file

meta

:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]

*_norm_table.tsv

:file

normalized count file

*.tsv

versions

versions.yml

:file

File containing software versions

versions.yml

Topics

name:type
description
pattern

versions

versions.yml

:string

The name of the process