remove false positives of functional crispr genomics due to CNVs
meta:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
count_file:file
sgRNA raw counts
*.tsv
library_file:file
sgRNA library
min_reads:integer
Minimum number of reads
min_targeted_genes:integer
Minimum number of targeted genes
norm_count_file
*_norm_table.tsv:file
normalized count file
versions
versions.yml:file
File containing software versions
versions.yml
Analysis of CRISPR functional genomics, remove false positive due to CNVs.
