Description

Splits CSV/TSV into multiple files according to column values

Input

name:type
description
pattern

meta

:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]

csv

:file

CSV/TSV file

*.{csv,tsv}

in_format

:string

Input format (csv, tab, or a delimiting character)

*

out_format

:string

Output format (csv, tab, or a delimiting character)

*

Output

name:type
description
pattern

split_csv

meta

:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]

*.${out_extension}

:file

Split CSV/TSV file

*.{csv,tsv}

versions_csvtk

${task.process}

:string

The name of the process

csvtk

:string

The name of the tool

csvtk version | sed -e 's/csvtk v//g'

:eval

The expression to obtain the version of the tool

Topics

name:type
description
pattern

versions

${task.process}

:string

The name of the process

csvtk

:string

The name of the tool

csvtk version | sed -e 's/csvtk v//g'

:eval

The expression to obtain the version of the tool

Tools

csvtk
MIT

CSVTK is a cross-platform, efficient and practical CSV/TSV toolkit that allows rapid data investigation and manipulation.